Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914045.1_cds_XP_016464071.1_57141
CDS Infomation

[gene=LOC107787065] [db_xref=GeneID:107787065] [protein=F-box/LRR-repeat protein 3] [protein_id=XP_016464071.1] [location=complement(join(85062..85118,85297..85548,85639..85933,86079..86208,86297..86690,86771..86875,87567..87692,89519..90196))] [gbkey=CDS]
Sequence

ATGATCCCTAAAGTTTCAATCTTGGGAACAATGAAGAAGCAAAAACCAAATTCACAATCC
AATTTCAACAATCACTTTGATCTTCTTTCTGAAGAAATTGTCTTTTCAATTCTTGATTAT
CTTAATGACAACCCAATTGACAAAAAATCATTTTCTCTTGTTTGTAAGACTTTTTATGCT
ACTGAATCTCACCATAGGAAAATCTTGAAACCCCTTAGGTCAGAACACTTGACAAAGATT
CTTAGCAGATACCCACAAGTTAACCATCTTGATCTTTCCCTTTGTCCTAGAATTACAGAC
AGTTCACTCACAGTTATAGCTAGTTTTTGCAAGGAAATGTTGAGGTCAATTAATCTTTCA
AGGTCTAAGTTTTTTACTCATTTGGGGTTGTCCAATTTGGTGTTAAACTGTGGGAATTTG
GTTGAAATTGATTTGTCAAATGCCACTGAGTTGAAGGATGTGGGTGCTGCTGCATTAGCT
GAGGCAAAGAACTTGGAGAAGTTGTGGTTGGTGAGGTGTAAGTCTATAACAGATATTGGA
CTTGGTTGTATTGCTGTAGGCTGCAGGAAGCTGAGGTTGCTTAGCTTGAGATGGTGTTTG
GGTGTTGGTGATTTAGGTGTGGGTTTAATTGCTGTTAAGTGTAAGGAGATTCGTTGTTTG
GATCTTTCTTACCTGCCGATCACTAATGAATGCTTATCGTCAATCTCGAAACTGCAATAT
CTTGAAGATTTGGTTCTAGAAGGTTGCTACGGGATTGATGATGACAGCCTTGCATCCCTC
AAGCAAGGCTGCAAGTCACTAAAGGCACTTGATATGTCAAGCTGTCAGAATGTTAGTCAC
GTGGGTTTGTCATCTCTCACTAGCAGTGCCGAATGTCTGCAGCAACTTATCTTAGCATAT
GGTTCTCCTGTAACATCAGCTGTCGCGGATAGCTTGCAGAAGCTTTCCAGGTTGCGGTCC
GTCAAACTAGATGGTTGCCAAGTTACATGCTCTGGACTGAAAGCTATTGGAAATTGGTGT
GTTTCACTAAGGGAACTGAGCTTAAGTAAATGCTTGGGGGTGACGGATGGTGGTCTCTGC
TCCCTCGTAACAAAGCACAAAGACTTAAGGAAGCTTGACATTACTTGTTGCCGCAAGATA
ACTCACGTATCCATTTCCCATATAACAAATTCCTGTGCCTCCCTTACTTCTCTCAGGATG
GAGTCTTGTACTCTAGTCCCGAGAGAAGCTTTTGTTCTAATTGGACAGCGTTGCCAGTAC
CTTGAAGAGCTTGACCTTACGGACAACGAAGTTGACGATGAAGGCTTGAAGTCCATTTCC
AAGTGTGCCCGTCTTTCCAGCCTAAAGCTGGGGATCTGCCTGAATATAACTGATCAGGGC
GTTACTCACATTGGCATGTGCTGCTCAAATCTTAAGGAGCTTGATTTATACAGATCAGCT
GGAATTTCCGACTTGGGAATATTAGCAATTGCTCGCGGTTGTGTTGGCCTTGAAATGATC
AATATTGCCTATTGCAATCGTATTACTGATGGCTCGTTCATATCTTTATCCAAGTGTTCA
AAGTTGAATACACTCGAAAGTAGAAGTTGTCCTTTTGTCACATCTTTTGGTCTTGCCGCT
GTTGCTGTGGGATGTAAGCAACTTACCAAGCTAGACATCAAAAACTGCCGCAACATTGAT
GATGCTGGAATGATTCCACTTGCTCACTTCTCGCTTAACCTCAAACAGATAAATTTATCG
TACACTTCAGTGACGGACGTGGGGCTGTTGTCTCTTGCCAGCATCAGAAGTCTGCAGAAC
ATGACAATCCTACACCTGAAAGGTTTGTCTCCCGGTGGACTAGGAGCTGCACTTTTGGCT
TGCGGCGGACTTACTAAAGTTAAGCTGCAGACATCATTTAAACCGTTGCTACCACAACCT
CTTCTTCAACATTTAGAAGCCCGAGGTTGTGTCTTCCAATGGAGAGAGAAACCATTTCAG
GCTGAAGTAGATCCACTATGCTGGAAGATTCAGCTGGATAATTTAGATGAAGATTAA

Peptide Sequence

PEP ID

XP_016464071.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein 3 [Nicotiana tabacum]
Sequence

MIPKVSILGTMKKQKPNSQSNFNNHFDLLSEEIVFSILDYLNDNPIDKKSFSLVCKTFYA
TESHHRKILKPLRSEHLTKILSRYPQVNHLDLSLCPRITDSSLTVIASFCKEMLRSINLS
RSKFFTHLGLSNLVLNCGNLVEIDLSNATELKDVGAAALAEAKNLEKLWLVRCKSITDIG
LGCIAVGCRKLRLLSLRWCLGVGDLGVGLIAVKCKEIRCLDLSYLPITNECLSSISKLQY
LEDLVLEGCYGIDDDSLASLKQGCKSLKALDMSSCQNVSHVGLSSLTSSAECLQQLILAY
GSPVTSAVADSLQKLSRLRSVKLDGCQVTCSGLKAIGNWCVSLRELSLSKCLGVTDGGLC
SLVTKHKDLRKLDITCCRKITHVSISHITNSCASLTSLRMESCTLVPREAFVLIGQRCQY
LEELDLTDNEVDDEGLKSISKCARLSSLKLGICLNITDQGVTHIGMCCSNLKELDLYRSA
GISDLGILAIARGCVGLEMINIAYCNRITDGSFISLSKCSKLNTLESRSCPFVTSFGLAA
VAVGCKQLTKLDIKNCRNIDDAGMIPLAHFSLNLKQINLSYTSVTDVGLLSLASIRSLQN
MTILHLKGLSPGGLGAALLACGGLTKVKLQTSFKPLLPQPLLQHLEARGCVFQWREKPFQ
AEVDPLCWKIQLDNLDED

Transcript Sequence

Gene sequence data has not been registered.